Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Gm12497-201ENSMUST00000138778 237 ntBASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tsen54Q8C2A2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms