Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cps1Q8C196 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cps1Q8C196 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
Cps1Q8C196 Gm45630-201ENSMUST00000210243 1911 ntBASIC19.14■□□□□ 0.65
Cps1Q8C196 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cps1Q8C196 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC19.14■□□□□ 0.65
Cps1Q8C196 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cps1Q8C196 Gm29741-201ENSMUST00000192667 421 ntBASIC19.14■□□□□ 0.65
Cps1Q8C196 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC19.14■□□□□ 0.65
Cps1Q8C196 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cps1Q8C196 AC073947.2-201ENSMUST00000215888 1130 ntBASIC19.14■□□□□ 0.65
Cps1Q8C196 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cps1Q8C196 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cps1Q8C196 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cps1Q8C196 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cps1Q8C196 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cps1Q8C196 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cps1Q8C196 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC19.13■□□□□ 0.65
Cps1Q8C196 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cps1Q8C196 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cps1Q8C196 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Cps1Q8C196 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC19.13■□□□□ 0.65
Cps1Q8C196 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC19.13■□□□□ 0.65
Cps1Q8C196 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Cps1Q8C196 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cps1Q8C196 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cps1Q8C196 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cps1Q8C196 Olfr582-201ENSMUST00000098212 960 ntBASIC19.13■□□□□ 0.65
Cps1Q8C196 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cps1Q8C196 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Cps1Q8C196 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cps1Q8C196 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cps1Q8C196 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cps1Q8C196 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC19.12■□□□□ 0.65
Cps1Q8C196 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cps1Q8C196 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC19.12■□□□□ 0.65
Cps1Q8C196 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Gm8565-201ENSMUST00000183259 1014 ntBASIC19.12■□□□□ 0.65
Cps1Q8C196 Gm38002-201ENSMUST00000193255 180 ntBASIC19.12■□□□□ 0.65
Cps1Q8C196 Gm19184-201ENSMUST00000196798 928 ntBASIC19.12■□□□□ 0.65
Cps1Q8C196 CU024892.2-201ENSMUST00000224608 832 ntBASIC19.12■□□□□ 0.65
Cps1Q8C196 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC19.12■□□□□ 0.65
Cps1Q8C196 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cps1Q8C196 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Gm29705-201ENSMUST00000212598 474 ntBASIC19.11■□□□□ 0.65
Cps1Q8C196 AC154171.1-201ENSMUST00000224610 643 ntBASIC19.11■□□□□ 0.65
Cps1Q8C196 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Cps1Q8C196 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC19.11■□□□□ 0.65
Cps1Q8C196 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cps1Q8C196 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
Cps1Q8C196 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Gm5687-201ENSMUST00000118252 640 ntBASIC19.1■□□□□ 0.65
Cps1Q8C196 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC19.1■□□□□ 0.65
Cps1Q8C196 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Cps1Q8C196 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Gm3809-201ENSMUST00000180973 1006 ntBASIC19.1■□□□□ 0.65
Cps1Q8C196 Gm27682-201ENSMUST00000183930 110 ntBASIC19.1■□□□□ 0.65
Cps1Q8C196 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC19.1■□□□□ 0.65
Cps1Q8C196 Gm6013-201ENSMUST00000212264 699 ntBASIC19.1■□□□□ 0.65
Cps1Q8C196 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cps1Q8C196 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cps1Q8C196 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC19.1■□□□□ 0.65
Cps1Q8C196 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms