Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Gm10275-202ENSMUST00000168697 495 ntBASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Gm9229-201ENSMUST00000222777 126 ntBASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Gm10275-201ENSMUST00000092620 635 ntBASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf2Q8BZT2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf2Q8BZT2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Sh3rf2Q8BZT2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Gm5186-201ENSMUST00000218781 920 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms