Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Gm6222-201ENSMUST00000120787 396 ntBASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Gm43818-201ENSMUST00000200605 466 ntBASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Chd9Q8BYH8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Chd9Q8BYH8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd9Q8BYH8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd9Q8BYH8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd9Q8BYH8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Chd9Q8BYH8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
Chd9Q8BYH8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.27□□□□□ -0.6
Chd9Q8BYH8 Mir125a-201ENSMUST00000083545 68 ntBASIC11.27□□□□□ -0.6
Chd9Q8BYH8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chd9Q8BYH8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Chd9Q8BYH8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd9Q8BYH8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Gm12208-201ENSMUST00000122004 163 ntBASIC11.27□□□□□ -0.61
Chd9Q8BYH8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Gm18935-201ENSMUST00000212692 664 ntBASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 BC001981-202ENSMUST00000191393 1545 ntBASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd9Q8BYH8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Gm8194-201ENSMUST00000159783 859 ntBASIC11.26□□□□□ -0.61
Chd9Q8BYH8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Gm27438-201ENSMUST00000183480 110 ntBASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Gm12566-201ENSMUST00000121479 359 ntBASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Chd9Q8BYH8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd9Q8BYH8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd9Q8BYH8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd9Q8BYH8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd9Q8BYH8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Chd9Q8BYH8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd9Q8BYH8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chd9Q8BYH8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms