Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Gm37153-201ENSMUST00000193637 231 ntBASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Gm2594-201ENSMUST00000214774 742 ntBASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm11Q8BUV6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm11Q8BUV6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Gm8749-201ENSMUST00000117737 331 ntBASIC12.34□□□□□ -0.43
Lsm11Q8BUV6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms