Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Fam43aQ8BUP8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Fam43aQ8BUP8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Fam43aQ8BUP8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Fam43aQ8BUP8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Fam43aQ8BUP8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Fam43aQ8BUP8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Fam43aQ8BUP8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Fam43aQ8BUP8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Fam43aQ8BUP8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam43aQ8BUP8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Fam43aQ8BUP8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms