Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Gm23984-201ENSMUST00000157139 203 ntBASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Gm42612-201ENSMUST00000197986 623 ntBASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Gm43170-201ENSMUST00000199827 612 ntBASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Gm9229-201ENSMUST00000222777 126 ntBASIC15.34■□□□□ 0.05
Rd3Q8BRE0 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.34■□□□□ 0.05
Rd3Q8BRE0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Mir125a-201ENSMUST00000083545 68 ntBASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rd3Q8BRE0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Rd3Q8BRE0 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.33■□□□□ 0.05
Rd3Q8BRE0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rd3Q8BRE0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rd3Q8BRE0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rd3Q8BRE0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Rd3Q8BRE0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rd3Q8BRE0 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.33■□□□□ 0.05
Rd3Q8BRE0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rd3Q8BRE0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.33■□□□□ 0.05
Rd3Q8BRE0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Gm6745-201ENSMUST00000199216 526 ntBASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.33■□□□□ 0.04
Rd3Q8BRE0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rd3Q8BRE0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rd3Q8BRE0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms