Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Gm25745-201ENSMUST00000174945 133 ntBASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco3Q8BQM7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Gm17808-201ENSMUST00000200859 894 ntBASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco3Q8BQM7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms