Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 CT009713.10-202ENSMUST00000225734 696 ntBASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Gm16342-201ENSMUST00000124025 1025 ntBASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Efs-202ENSMUST00000227037 2540 ntBASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Gm12485-201ENSMUST00000119641 291 ntBASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Gm4959-201ENSMUST00000197271 1044 ntBASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col16a1Q8BLX7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Gm8927-201ENSMUST00000181978 981 ntBASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Gm8565-201ENSMUST00000183259 1014 ntBASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Gm3222-201ENSMUST00000071282 990 ntBASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col16a1Q8BLX7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Gm14723-201ENSMUST00000118686 215 ntBASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Gm16177-201ENSMUST00000120728 718 ntBASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Gm24420-201ENSMUST00000176676 59 ntBASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.65■□□□□ 0.58
Col16a1Q8BLX7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col16a1Q8BLX7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Col16a1Q8BLX7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Col16a1Q8BLX7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Col16a1Q8BLX7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Col16a1Q8BLX7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.64■□□□□ 0.58
Col16a1Q8BLX7 Gm40466-201ENSMUST00000212174 422 ntBASIC18.64■□□□□ 0.58
Col16a1Q8BLX7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col16a1Q8BLX7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms