Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Gm43179-201ENSMUST00000198797 275 ntBASIC20.24■□□□□ 0.83
Usp54Q8BL06 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Usp54Q8BL06 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Gm29608-201ENSMUST00000190444 463 ntBASIC20.23■□□□□ 0.83
Usp54Q8BL06 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp54Q8BL06 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp54Q8BL06 Efs-202ENSMUST00000227037 2540 ntBASIC20.23■□□□□ 0.83
Usp54Q8BL06 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC20.23■□□□□ 0.83
Usp54Q8BL06 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC20.22■□□□□ 0.83
Usp54Q8BL06 Gm7553-201ENSMUST00000185805 1426 ntBASIC20.22■□□□□ 0.83
Usp54Q8BL06 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Gm42853-201ENSMUST00000201273 1387 ntBASIC20.22■□□□□ 0.83
Usp54Q8BL06 Trav4d-2-201ENSMUST00000120914 335 ntBASIC20.22■□□□□ 0.83
Usp54Q8BL06 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC20.22■□□□□ 0.83
Usp54Q8BL06 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Gm8810-201ENSMUST00000172895 754 ntBASIC20.22■□□□□ 0.83
Usp54Q8BL06 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Gm27572-201ENSMUST00000183702 255 ntBASIC20.22■□□□□ 0.83
Usp54Q8BL06 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp54Q8BL06 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Gm29741-201ENSMUST00000192667 421 ntBASIC20.21■□□□□ 0.83
Usp54Q8BL06 Gm38223-201ENSMUST00000194484 695 ntBASIC20.21■□□□□ 0.83
Usp54Q8BL06 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Dctn4-202ENSMUST00000223590 1530 ntBASIC20.21■□□□□ 0.83
Usp54Q8BL06 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC20.21■□□□□ 0.83
Usp54Q8BL06 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp54Q8BL06 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms