Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Gm17795-201ENSMUST00000214505 757 ntBASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Gm5035-201ENSMUST00000215581 927 ntBASIC15.18■□□□□ 0.02
Npas4Q8BGD7 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npas4Q8BGD7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Gm15678-201ENSMUST00000117573 960 ntBASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Mir7654-201ENSMUST00000185082 70 ntBASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npas4Q8BGD7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Gm37660-201ENSMUST00000192754 1732 ntBASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Npas4Q8BGD7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Npas4Q8BGD7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms