Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3tc2Q80VA5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Gm11478-201ENSMUST00000117851 599 ntBASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Gm4875-201ENSMUST00000118257 786 ntBASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Sh3tc2Q80VA5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3tc2Q80VA5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Sh3tc2Q80VA5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3tc2Q80VA5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3tc2Q80VA5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3tc2Q80VA5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3tc2Q80VA5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Gm12091-201ENSMUST00000146791 830 ntBASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Gm46209-201ENSMUST00000217912 553 ntBASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Gm20445-201ENSMUST00000061905 565 ntBASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3tc2Q80VA5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Gm14042-201ENSMUST00000120139 833 ntBASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Gm9908-201ENSMUST00000211534 448 ntBASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3tc2Q80VA5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3tc2Q80VA5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3tc2Q80VA5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms