Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mir6977-201ENSMUST00000184960 64 ntBASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Gm44344-201ENSMUST00000200287 129 ntBASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdh19Q80TF3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Gm12151-201ENSMUST00000121374 290 ntBASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Gm27989-201ENSMUST00000184721 107 ntBASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Gm37230-201ENSMUST00000194491 818 ntBASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh19Q80TF3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh19Q80TF3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh19Q80TF3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh19Q80TF3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh19Q80TF3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Pcdh19Q80TF3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh19Q80TF3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh19Q80TF3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh19Q80TF3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh19Q80TF3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Gm27680-201ENSMUST00000184192 160 ntBASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Gm27321-201ENSMUST00000185021 205 ntBASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms