Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh8Q7TSK3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Mir8102-201ENSMUST00000184148 139 ntBASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh8Q7TSK3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Gm28630-201ENSMUST00000187806 498 ntBASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Gm45098-201ENSMUST00000207179 657 ntBASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh8Q7TSK3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms