Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nudcd1Q6PIP5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Gm9063-201ENSMUST00000223299 582 ntBASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nudcd1Q6PIP5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nudcd1Q6PIP5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nudcd1Q6PIP5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nudcd1Q6PIP5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nudcd1Q6PIP5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nudcd1Q6PIP5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nudcd1Q6PIP5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nudcd1Q6PIP5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nudcd1Q6PIP5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nudcd1Q6PIP5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nudcd1Q6PIP5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nudcd1Q6PIP5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nudcd1Q6PIP5 Gm27437-201ENSMUST00000183429 107 ntBASIC14.58□□□□□ -0.08
Nudcd1Q6PIP5 Mir6977-201ENSMUST00000184960 64 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms