Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Mir3081-201ENSMUST00000175305 84 ntBASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Gm6659-201ENSMUST00000174752 547 ntBASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Gm9172-201ENSMUST00000212092 954 ntBASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf220Q6PDX6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf220Q6PDX6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.73□□□□□ -0.21
Rnf220Q6PDX6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf220Q6PDX6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf220Q6PDX6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf220Q6PDX6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf220Q6PDX6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf220Q6PDX6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf220Q6PDX6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.73□□□□□ -0.21
Rnf220Q6PDX6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms