Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.19■□□□□ 0.34
Col11a2Q64739 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.19■□□□□ 0.34
Col11a2Q64739 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col11a2Q64739 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.18■□□□□ 0.34
Col11a2Q64739 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Col11a2Q64739 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col11a2Q64739 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.18■□□□□ 0.34
Col11a2Q64739 Gm13342-201ENSMUST00000121055 207 ntBASIC17.18■□□□□ 0.34
Col11a2Q64739 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Col11a2Q64739 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.18■□□□□ 0.34
Col11a2Q64739 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.18■□□□□ 0.34
Col11a2Q64739 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.18■□□□□ 0.34
Col11a2Q64739 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.18■□□□□ 0.34
Col11a2Q64739 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.18■□□□□ 0.34
Col11a2Q64739 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.18■□□□□ 0.34
Col11a2Q64739 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Col11a2Q64739 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col11a2Q64739 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.18■□□□□ 0.34
Col11a2Q64739 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col11a2Q64739 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.17■□□□□ 0.34
Col11a2Q64739 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC17.17■□□□□ 0.34
Col11a2Q64739 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.17■□□□□ 0.34
Col11a2Q64739 Gm29396-201ENSMUST00000185659 716 ntBASIC17.17■□□□□ 0.34
Col11a2Q64739 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Col11a2Q64739 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.17■□□□□ 0.34
Col11a2Q64739 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col11a2Q64739 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Col11a2Q64739 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.16■□□□□ 0.34
Col11a2Q64739 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.16■□□□□ 0.34
Col11a2Q64739 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.16■□□□□ 0.34
Col11a2Q64739 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Col11a2Q64739 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col11a2Q64739 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Col11a2Q64739 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.16■□□□□ 0.34
Col11a2Q64739 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.16■□□□□ 0.34
Col11a2Q64739 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.16■□□□□ 0.34
Col11a2Q64739 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.16■□□□□ 0.34
Col11a2Q64739 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.16■□□□□ 0.34
Col11a2Q64739 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.16■□□□□ 0.34
Col11a2Q64739 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.16■□□□□ 0.34
Col11a2Q64739 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col11a2Q64739 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col11a2Q64739 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.15■□□□□ 0.34
Col11a2Q64739 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col11a2Q64739 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Col11a2Q64739 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms