Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Mir6420-201ENSMUST00000185032 102 ntBASIC13.8□□□□□ -0.2
Rai1Q61818 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.8□□□□□ -0.2
Rai1Q61818 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.8□□□□□ -0.2
Rai1Q61818 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.8□□□□□ -0.2
Rai1Q61818 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.8□□□□□ -0.2
Rai1Q61818 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.8□□□□□ -0.2
Rai1Q61818 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.8□□□□□ -0.2
Rai1Q61818 Gm14660-201ENSMUST00000119809 575 ntBASIC13.8□□□□□ -0.2
Rai1Q61818 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.8□□□□□ -0.2
Rai1Q61818 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Rai1Q61818 Gm17420-201ENSMUST00000164753 153 ntBASIC13.8□□□□□ -0.2
Rai1Q61818 Gm24196-201ENSMUST00000179161 110 ntBASIC13.8□□□□□ -0.2
Rai1Q61818 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.8□□□□□ -0.2
Rai1Q61818 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.8□□□□□ -0.2
Rai1Q61818 Gm37714-201ENSMUST00000194742 342 ntBASIC13.8□□□□□ -0.2
Rai1Q61818 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Gm45331-201ENSMUST00000209868 554 ntBASIC13.8□□□□□ -0.2
Rai1Q61818 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rai1Q61818 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Rai1Q61818 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rai1Q61818 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
Rai1Q61818 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.79□□□□□ -0.2
Rai1Q61818 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.79□□□□□ -0.2
Rai1Q61818 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rai1Q61818 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.79□□□□□ -0.2
Rai1Q61818 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.79□□□□□ -0.2
Rai1Q61818 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Rai1Q61818 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rai1Q61818 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rai1Q61818 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Rai1Q61818 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rai1Q61818 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.78□□□□□ -0.2
Rai1Q61818 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.78□□□□□ -0.2
Rai1Q61818 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rai1Q61818 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.78□□□□□ -0.2
Rai1Q61818 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.78□□□□□ -0.2
Rai1Q61818 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rai1Q61818 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.78□□□□□ -0.2
Rai1Q61818 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.78□□□□□ -0.2
Rai1Q61818 Gm18905-201ENSMUST00000205454 928 ntBASIC13.78□□□□□ -0.2
Rai1Q61818 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rai1Q61818 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms