Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfaip3Q60769 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfaip3Q60769 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfaip3Q60769 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfaip3Q60769 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Tnfaip3Q60769 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfaip3Q60769 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfaip3Q60769 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfaip3Q60769 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfaip3Q60769 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfaip3Q60769 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfaip3Q60769 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Auts2-212ENSMUST00000178555 309 ntBASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Gm29541-201ENSMUST00000191351 678 ntBASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Gm10576-201ENSMUST00000191927 825 ntBASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfaip3Q60769 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Gm8410-201ENSMUST00000117225 605 ntBASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Gm18766-201ENSMUST00000189811 808 ntBASIC13.61□□□□□ -0.23
Tnfaip3Q60769 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms