Protein–RNA interactions for Protein: Q60765

Atf3, Cyclic AMP-dependent transcription factor ATF-3, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf3Q60765 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Atf3Q60765 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.23■□□□□ 0.67
Atf3Q60765 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Gm15371-201ENSMUST00000117057 784 ntBASIC19.23■□□□□ 0.67
Atf3Q60765 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Atf3Q60765 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC19.23■□□□□ 0.67
Atf3Q60765 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.23■□□□□ 0.67
Atf3Q60765 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC19.23■□□□□ 0.67
Atf3Q60765 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Gm37714-201ENSMUST00000194742 342 ntBASIC19.23■□□□□ 0.67
Atf3Q60765 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC19.23■□□□□ 0.67
Atf3Q60765 Gm19309-201ENSMUST00000218295 205 ntBASIC19.23■□□□□ 0.67
Atf3Q60765 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atf3Q60765 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC19.22■□□□□ 0.67
Atf3Q60765 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Atf3Q60765 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Atf3Q60765 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC19.22■□□□□ 0.67
Atf3Q60765 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC19.22■□□□□ 0.67
Atf3Q60765 Ighv8-14-201ENSMUST00000196781 358 ntBASIC19.22■□□□□ 0.67
Atf3Q60765 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Atf3Q60765 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Atf3Q60765 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Atf3Q60765 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Atf3Q60765 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf3Q60765 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Gm21038-201ENSMUST00000222205 1383 ntBASIC19.21■□□□□ 0.67
Atf3Q60765 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Atf3Q60765 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Atf3Q60765 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Atf3Q60765 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Atf3Q60765 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Atf3Q60765 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Gm27516-201ENSMUST00000184237 98 ntBASIC19.21■□□□□ 0.67
Atf3Q60765 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC19.21■□□□□ 0.67
Atf3Q60765 Gm7783-201ENSMUST00000204795 781 ntBASIC19.21■□□□□ 0.67
Atf3Q60765 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Atf3Q60765 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Atf3Q60765 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf3Q60765 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.2■□□□□ 0.66
Atf3Q60765 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.2■□□□□ 0.66
Atf3Q60765 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Atf3Q60765 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC19.2■□□□□ 0.66
Atf3Q60765 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC19.2■□□□□ 0.66
Atf3Q60765 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Atf3Q60765 Gm5069-202ENSMUST00000192714 1011 ntBASIC19.2■□□□□ 0.66
Atf3Q60765 Gm44397-201ENSMUST00000195950 113 ntBASIC19.2■□□□□ 0.66
Atf3Q60765 Gm45930-201ENSMUST00000221330 292 ntBASIC19.2■□□□□ 0.66
Atf3Q60765 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC19.2■□□□□ 0.66
Atf3Q60765 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.2■□□□□ 0.66
Atf3Q60765 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Atf3Q60765 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf3Q60765 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Atf3Q60765 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms