Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.91□□□□□ -0.18
ClpbQ60649 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.91□□□□□ -0.18
ClpbQ60649 Gm13365-201ENSMUST00000121188 973 ntBASIC13.91□□□□□ -0.18
ClpbQ60649 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.91□□□□□ -0.18
ClpbQ60649 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Gm16026-204ENSMUST00000162652 683 ntBASIC13.91□□□□□ -0.18
ClpbQ60649 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.91□□□□□ -0.18
ClpbQ60649 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.91□□□□□ -0.18
ClpbQ60649 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.91□□□□□ -0.18
ClpbQ60649 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
ClpbQ60649 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
ClpbQ60649 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpbQ60649 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ClpbQ60649 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
ClpbQ60649 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ClpbQ60649 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
ClpbQ60649 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ClpbQ60649 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.9□□□□□ -0.18
ClpbQ60649 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.9□□□□□ -0.18
ClpbQ60649 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
ClpbQ60649 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
ClpbQ60649 Gm20553-201ENSMUST00000204205 844 ntBASIC13.9□□□□□ -0.18
ClpbQ60649 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.9□□□□□ -0.18
ClpbQ60649 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ClpbQ60649 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ClpbQ60649 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ClpbQ60649 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ClpbQ60649 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.9□□□□□ -0.18
ClpbQ60649 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpbQ60649 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
ClpbQ60649 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ClpbQ60649 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.89□□□□□ -0.19
ClpbQ60649 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
ClpbQ60649 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
ClpbQ60649 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.89□□□□□ -0.19
ClpbQ60649 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.89□□□□□ -0.19
ClpbQ60649 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ClpbQ60649 Gm18057-201ENSMUST00000208220 503 ntBASIC13.89□□□□□ -0.19
ClpbQ60649 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.89□□□□□ -0.19
ClpbQ60649 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Gm8396-201ENSMUST00000057361 823 ntBASIC13.89□□□□□ -0.19
ClpbQ60649 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.89□□□□□ -0.19
ClpbQ60649 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.89□□□□□ -0.19
ClpbQ60649 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpbQ60649 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.89□□□□□ -0.19
ClpbQ60649 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms