Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5d-4Q5R1F6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5d-4Q5R1F6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.45□□□□□ -0.42
Trav5d-4Q5R1F6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms