Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Gm18737-201ENSMUST00000173594 937 ntBASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf20Q5DTM8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf20Q5DTM8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf20Q5DTM8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms