Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx49Q4FZF3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx49Q4FZF3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Ddx49Q4FZF3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx49Q4FZF3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx49Q4FZF3 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.83■□□□□ 0.29
Ddx49Q4FZF3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx49Q4FZF3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx49Q4FZF3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Prob1-201ENSMUST00000097619 3021 ntBASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx49Q4FZF3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Mir6420-201ENSMUST00000185032 102 ntBASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx49Q4FZF3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Mir125a-201ENSMUST00000083545 68 ntBASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ddx49Q4FZF3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.8■□□□□ 0.28
Ddx49Q4FZF3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx49Q4FZF3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx49Q4FZF3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx49Q4FZF3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx49Q4FZF3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx49Q4FZF3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx49Q4FZF3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx49Q4FZF3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms