Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Gm12176-201ENSMUST00000121420 875 ntBASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Gm43758-201ENSMUST00000199500 367 ntBASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shank3Q4ACU6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Efs-202ENSMUST00000227037 2540 ntBASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Gm10156-201ENSMUST00000122364 462 ntBASIC17.66■□□□□ 0.42
Shank3Q4ACU6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Gm2445-201ENSMUST00000182798 989 ntBASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.66■□□□□ 0.42
Shank3Q4ACU6 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.66■□□□□ 0.42
Shank3Q4ACU6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Gm27516-201ENSMUST00000184237 98 ntBASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Gm38223-201ENSMUST00000194484 695 ntBASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shank3Q4ACU6 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Gm27243-201ENSMUST00000183964 521 ntBASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Gm8213-201ENSMUST00000118191 441 ntBASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Gm7029-201ENSMUST00000173226 450 ntBASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Gm24420-201ENSMUST00000176676 59 ntBASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Gm24526-201ENSMUST00000082921 158 ntBASIC17.64■□□□□ 0.41
Shank3Q4ACU6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Mir686-201ENSMUST00000102174 109 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms