Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Gm45880-201ENSMUST00000213041 853 ntBASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fam196aQ3USH1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Fam196aQ3USH1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Fam196aQ3USH1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Fam196aQ3USH1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Fam196aQ3USH1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Gm13350-201ENSMUST00000120519 479 ntBASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Gm38266-201ENSMUST00000194931 421 ntBASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fam196aQ3USH1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Gm7584-201ENSMUST00000175829 940 ntBASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Gm43818-201ENSMUST00000200605 466 ntBASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Gm18753-201ENSMUST00000201000 566 ntBASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Gm24526-201ENSMUST00000082921 158 ntBASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fam196aQ3USH1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms