Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Nhlrc4Q3UP44 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc4Q3UP44 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc4Q3UP44 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc4Q3UP44 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc4Q3UP44 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc4Q3UP44 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc4Q3UP44 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc4Q3UP44 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nhlrc4Q3UP44 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Gm13823-201ENSMUST00000119930 345 ntBASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Gm9824-201ENSMUST00000178707 561 ntBASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Gm5779-201ENSMUST00000218467 910 ntBASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nhlrc4Q3UP44 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nhlrc4Q3UP44 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Mir449b-201ENSMUST00000104833 80 ntBASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Gm14701-201ENSMUST00000117156 348 ntBASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Gm24158-201ENSMUST00000175263 71 ntBASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Gm5867-201ENSMUST00000063197 592 ntBASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nhlrc4Q3UP44 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms