Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Treml4Q3LRV9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Gm15653-201ENSMUST00000119247 907 ntBASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Treml4Q3LRV9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Gm6912-201ENSMUST00000117218 544 ntBASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Treml4Q3LRV9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Gm11478-201ENSMUST00000117851 599 ntBASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Gm14928-201ENSMUST00000120198 477 ntBASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.6□□□□□ -0.23
Treml4Q3LRV9 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Treml4Q3LRV9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Treml4Q3LRV9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Treml4Q3LRV9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Treml4Q3LRV9 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.59□□□□□ -0.23
Treml4Q3LRV9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.59□□□□□ -0.23
Treml4Q3LRV9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Treml4Q3LRV9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms