Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim63Q38HM4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.94□□□□□ -0.5
Trim63Q38HM4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Gm12382-201ENSMUST00000122005 922 ntBASIC11.94□□□□□ -0.5
Trim63Q38HM4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Gm25925-201ENSMUST00000158314 306 ntBASIC11.94□□□□□ -0.5
Trim63Q38HM4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.94□□□□□ -0.5
Trim63Q38HM4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.94□□□□□ -0.5
Trim63Q38HM4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim63Q38HM4 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.94□□□□□ -0.5
Trim63Q38HM4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim63Q38HM4 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.93□□□□□ -0.5
Trim63Q38HM4 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.93□□□□□ -0.5
Trim63Q38HM4 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.93□□□□□ -0.5
Trim63Q38HM4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.93□□□□□ -0.5
Trim63Q38HM4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.93□□□□□ -0.5
Trim63Q38HM4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim63Q38HM4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms