Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp11Q02853 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp11Q02853 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp11Q02853 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mmp11Q02853 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp11Q02853 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp11Q02853 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mmp11Q02853 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Mmp11Q02853 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.1□□□□□ -0.15
Mmp11Q02853 Gm2756-201ENSMUST00000195851 400 ntBASIC14.1□□□□□ -0.15
Mmp11Q02853 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp11Q02853 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Mmp11Q02853 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Mmp11Q02853 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Mmp11Q02853 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Mmp11Q02853 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Mmp11Q02853 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Mmp11Q02853 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.09□□□□□ -0.15
Mmp11Q02853 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Mir6990-201ENSMUST00000183724 91 ntBASIC14.09□□□□□ -0.15
Mmp11Q02853 Gm27702-201ENSMUST00000184512 56 ntBASIC14.09□□□□□ -0.15
Mmp11Q02853 Gm38225-201ENSMUST00000194001 393 ntBASIC14.09□□□□□ -0.15
Mmp11Q02853 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.09□□□□□ -0.15
Mmp11Q02853 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.09□□□□□ -0.15
Mmp11Q02853 Gm5867-201ENSMUST00000063197 592 ntBASIC14.09□□□□□ -0.15
Mmp11Q02853 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.09□□□□□ -0.15
Mmp11Q02853 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.09□□□□□ -0.15
Mmp11Q02853 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp11Q02853 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mmp11Q02853 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Mmp11Q02853 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.08□□□□□ -0.15
Mmp11Q02853 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mmp11Q02853 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp11Q02853 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp11Q02853 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp11Q02853 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp11Q02853 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp11Q02853 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp11Q02853 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp11Q02853 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms