Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.71□□□□□ -0.21
Nkx3-2P97503 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nkx3-2P97503 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Gm18049-201ENSMUST00000208909 581 ntBASIC13.71□□□□□ -0.21
Nkx3-2P97503 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.71□□□□□ -0.21
Nkx3-2P97503 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Nkx3-2P97503 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx3-2P97503 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx3-2P97503 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Nkx3-2P97503 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx3-2P97503 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Nkx3-2P97503 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.7□□□□□ -0.22
Nkx3-2P97503 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.7□□□□□ -0.22
Nkx3-2P97503 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Gm12134-201ENSMUST00000122109 520 ntBASIC13.7□□□□□ -0.22
Nkx3-2P97503 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Gm5779-201ENSMUST00000218467 910 ntBASIC13.7□□□□□ -0.22
Nkx3-2P97503 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx3-2P97503 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.69□□□□□ -0.22
Nkx3-2P97503 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.69□□□□□ -0.22
Nkx3-2P97503 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx3-2P97503 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx3-2P97503 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms