Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.35□□□□□ -0.27
Cacna1aP97445 Gm15806-201ENSMUST00000120696 955 ntBASIC13.35□□□□□ -0.27
Cacna1aP97445 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.35□□□□□ -0.27
Cacna1aP97445 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cacna1aP97445 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cacna1aP97445 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cacna1aP97445 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.35□□□□□ -0.27
Cacna1aP97445 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cacna1aP97445 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cacna1aP97445 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.35□□□□□ -0.27
Cacna1aP97445 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.35□□□□□ -0.27
Cacna1aP97445 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.35□□□□□ -0.27
Cacna1aP97445 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacna1aP97445 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Cacna1aP97445 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Gm2495-201ENSMUST00000191160 466 ntBASIC13.34□□□□□ -0.27
Cacna1aP97445 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.34□□□□□ -0.27
Cacna1aP97445 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Cacna1aP97445 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cacna1aP97445 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.34□□□□□ -0.27
Cacna1aP97445 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.34□□□□□ -0.27
Cacna1aP97445 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.34□□□□□ -0.27
Cacna1aP97445 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cacna1aP97445 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1aP97445 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cacna1aP97445 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cacna1aP97445 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Cacna1aP97445 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Cacna1aP97445 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cacna1aP97445 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.33□□□□□ -0.28
Cacna1aP97445 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1aP97445 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1aP97445 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.33□□□□□ -0.28
Cacna1aP97445 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Gm18753-201ENSMUST00000201000 566 ntBASIC13.33□□□□□ -0.28
Cacna1aP97445 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.33□□□□□ -0.28
Cacna1aP97445 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1aP97445 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.32□□□□□ -0.28
Cacna1aP97445 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Snora78-201ENSMUST00000158630 128 ntBASIC13.32□□□□□ -0.28
Cacna1aP97445 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Mir6392-201ENSMUST00000184924 108 ntBASIC13.32□□□□□ -0.28
Cacna1aP97445 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms