Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim43bP86448 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.92□□□□□ -0.02
Trim43bP86448 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.92□□□□□ -0.02
Trim43bP86448 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.92□□□□□ -0.02
Trim43bP86448 Mir3113-201ENSMUST00000175478 76 ntBASIC14.92□□□□□ -0.02
Trim43bP86448 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Gm4899-201ENSMUST00000178708 719 ntBASIC14.92□□□□□ -0.02
Trim43bP86448 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.92□□□□□ -0.02
Trim43bP86448 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.92□□□□□ -0.02
Trim43bP86448 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43bP86448 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim43bP86448 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim43bP86448 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.91□□□□□ -0.02
Trim43bP86448 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim43bP86448 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Gm6736-201ENSMUST00000166583 948 ntBASIC14.91□□□□□ -0.02
Trim43bP86448 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim43bP86448 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim43bP86448 Gm43767-201ENSMUST00000198933 381 ntBASIC14.91□□□□□ -0.02
Trim43bP86448 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Trim43bP86448 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim43bP86448 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim43bP86448 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.91□□□□□ -0.02
Trim43bP86448 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim43bP86448 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim43bP86448 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43bP86448 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim43bP86448 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim43bP86448 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim43bP86448 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.9□□□□□ -0.02
Trim43bP86448 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim43bP86448 Gm27300-201ENSMUST00000184085 97 ntBASIC14.9□□□□□ -0.02
Trim43bP86448 Gm27335-201ENSMUST00000184758 97 ntBASIC14.9□□□□□ -0.02
Trim43bP86448 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.9□□□□□ -0.02
Trim43bP86448 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.9□□□□□ -0.02
Trim43bP86448 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43bP86448 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim43bP86448 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43bP86448 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43bP86448 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms