Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SgcaP82350 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.16□□□□□ -0.46
SgcaP82350 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.16□□□□□ -0.46
SgcaP82350 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SgcaP82350 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.15□□□□□ -0.46
SgcaP82350 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SgcaP82350 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.15□□□□□ -0.46
SgcaP82350 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.15□□□□□ -0.46
SgcaP82350 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.15□□□□□ -0.46
SgcaP82350 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SgcaP82350 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.15□□□□□ -0.46
SgcaP82350 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SgcaP82350 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcaP82350 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SgcaP82350 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SgcaP82350 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.14□□□□□ -0.47
SgcaP82350 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
SgcaP82350 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.14□□□□□ -0.47
SgcaP82350 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.14□□□□□ -0.47
SgcaP82350 Gm10499-201ENSMUST00000174094 934 ntBASIC12.14□□□□□ -0.47
SgcaP82350 Mir3081-201ENSMUST00000175305 84 ntBASIC12.14□□□□□ -0.47
SgcaP82350 Gm43767-201ENSMUST00000198933 381 ntBASIC12.14□□□□□ -0.47
SgcaP82350 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.14□□□□□ -0.47
SgcaP82350 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.14□□□□□ -0.47
SgcaP82350 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.14□□□□□ -0.47
SgcaP82350 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcaP82350 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SgcaP82350 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
SgcaP82350 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcaP82350 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcaP82350 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcaP82350 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcaP82350 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.13□□□□□ -0.47
SgcaP82350 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SgcaP82350 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.13□□□□□ -0.47
SgcaP82350 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
SgcaP82350 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcaP82350 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcaP82350 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcaP82350 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcaP82350 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SgcaP82350 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcaP82350 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.13□□□□□ -0.47
SgcaP82350 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcaP82350 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms