Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pdlim4P70271 Mir1895-201ENSMUST00000122615 79 ntBASIC12.07□□□□□ -0.48
Pdlim4P70271 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.07□□□□□ -0.48
Pdlim4P70271 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Pdlim4P70271 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Gm27494-201ENSMUST00000184735 189 ntBASIC12.07□□□□□ -0.48
Pdlim4P70271 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.07□□□□□ -0.48
Pdlim4P70271 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Efs-202ENSMUST00000227037 2540 ntBASIC12.07□□□□□ -0.48
Pdlim4P70271 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdlim4P70271 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pdlim4P70271 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Pdlim4P70271 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim4P70271 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pdlim4P70271 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.06□□□□□ -0.48
Pdlim4P70271 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Pdlim4P70271 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Pdlim4P70271 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.06□□□□□ -0.48
Pdlim4P70271 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.06□□□□□ -0.48
Pdlim4P70271 Gm11543-201ENSMUST00000120758 370 ntBASIC12.06□□□□□ -0.48
Pdlim4P70271 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.06□□□□□ -0.48
Pdlim4P70271 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.06□□□□□ -0.48
Pdlim4P70271 Rprl2-201ENSMUST00000157150 290 ntBASIC12.06□□□□□ -0.48
Pdlim4P70271 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.06□□□□□ -0.48
Pdlim4P70271 Gm45612-201ENSMUST00000211320 160 ntBASIC12.06□□□□□ -0.48
Pdlim4P70271 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.06□□□□□ -0.48
Pdlim4P70271 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Pdlim4P70271 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim4P70271 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.06□□□□□ -0.48
Pdlim4P70271 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Pdlim4P70271 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pdlim4P70271 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.05□□□□□ -0.48
Pdlim4P70271 Gm12134-201ENSMUST00000122109 520 ntBASIC12.05□□□□□ -0.48
Pdlim4P70271 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Pdlim4P70271 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pdlim4P70271 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.05□□□□□ -0.48
Pdlim4P70271 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.05□□□□□ -0.48
Pdlim4P70271 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms