Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Crnkl1P63154 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Crnkl1P63154 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Crnkl1P63154 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Crnkl1P63154 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Crnkl1P63154 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Crnkl1P63154 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Crnkl1P63154 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Crnkl1P63154 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Crnkl1P63154 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.34□□□□□ -0.11
Crnkl1P63154 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Gm25406-201ENSMUST00000157599 105 ntBASIC14.34□□□□□ -0.11
Crnkl1P63154 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Crnkl1P63154 Gm9172-201ENSMUST00000212092 954 ntBASIC14.34□□□□□ -0.11
Crnkl1P63154 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.34□□□□□ -0.11
Crnkl1P63154 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Crnkl1P63154 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.34□□□□□ -0.11
Crnkl1P63154 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crnkl1P63154 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.33□□□□□ -0.11
Crnkl1P63154 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Crnkl1P63154 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Crnkl1P63154 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Crnkl1P63154 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Crnkl1P63154 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.33□□□□□ -0.12
Crnkl1P63154 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.33□□□□□ -0.12
Crnkl1P63154 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Crnkl1P63154 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.33□□□□□ -0.12
Crnkl1P63154 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Crnkl1P63154 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Crnkl1P63154 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Crnkl1P63154 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Crnkl1P63154 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crnkl1P63154 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.32□□□□□ -0.12
Crnkl1P63154 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.32□□□□□ -0.12
Crnkl1P63154 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Crnkl1P63154 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Crnkl1P63154 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.32□□□□□ -0.12
Crnkl1P63154 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.32□□□□□ -0.12
Crnkl1P63154 Gm28659-201ENSMUST00000188013 759 ntBASIC14.32□□□□□ -0.12
Crnkl1P63154 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.32□□□□□ -0.12
Crnkl1P63154 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.32□□□□□ -0.12
Crnkl1P63154 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crnkl1P63154 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms