Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC8.47□□□□□ -1.05
Rps28P62858 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Rps28P62858 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Rps28P62858 Etf1-202ENSMUST00000180351 108 ntBASIC8.47□□□□□ -1.05
Rps28P62858 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Rps28P62858 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rps28P62858 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rps28P62858 Btrc-209ENSMUST00000224478 2194 ntBASIC8.46□□□□□ -1.05
Rps28P62858 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC8.46□□□□□ -1.05
Rps28P62858 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
Rps28P62858 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Rps28P62858 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC8.46□□□□□ -1.05
Rps28P62858 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Rps28P62858 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC8.46□□□□□ -1.05
Rps28P62858 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Rps28P62858 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Rps28P62858 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rps28P62858 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC8.46□□□□□ -1.06
Rps28P62858 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Gm14464-201ENSMUST00000119658 1254 ntBASIC8.46□□□□□ -1.06
Rps28P62858 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Rps28P62858 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC8.46□□□□□ -1.06
Rps28P62858 Gm24970-201ENSMUST00000175582 82 ntBASIC8.46□□□□□ -1.06
Rps28P62858 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC8.46□□□□□ -1.06
Rps28P62858 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Rps28P62858 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC8.46□□□□□ -1.06
Rps28P62858 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Rps28P62858 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
Rps28P62858 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
Rps28P62858 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Rps28P62858 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms