Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Gabra1P62812 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gabra1P62812 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.21□□□□□ -0.46
Gabra1P62812 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gabra1P62812 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gabra1P62812 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gabra1P62812 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Gabra1P62812 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gabra1P62812 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gabra1P62812 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gabra1P62812 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Gabra1P62812 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.2□□□□□ -0.46
Gabra1P62812 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.2□□□□□ -0.46
Gabra1P62812 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Gabra1P62812 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Gabra1P62812 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Gabra1P62812 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gabra1P62812 Gm6433-201ENSMUST00000118634 875 ntBASIC12.2□□□□□ -0.46
Gabra1P62812 Gm15565-201ENSMUST00000118890 427 ntBASIC12.2□□□□□ -0.46
Gabra1P62812 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.2□□□□□ -0.46
Gabra1P62812 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.2□□□□□ -0.46
Gabra1P62812 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.2□□□□□ -0.46
Gabra1P62812 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Gabra1P62812 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Gabra1P62812 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.2□□□□□ -0.46
Gabra1P62812 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Rubie-203ENSMUST00000227803 2430 ntBASIC12.2□□□□□ -0.46
Gabra1P62812 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gabra1P62812 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gabra1P62812 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Gabra1P62812 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gabra1P62812 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.19□□□□□ -0.46
Gabra1P62812 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.19□□□□□ -0.46
Gabra1P62812 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.19□□□□□ -0.46
Gabra1P62812 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.19□□□□□ -0.46
Gabra1P62812 Mir3081-201ENSMUST00000175305 84 ntBASIC12.19□□□□□ -0.46
Gabra1P62812 Gm6345-202ENSMUST00000180900 204 ntBASIC12.19□□□□□ -0.46
Gabra1P62812 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.19□□□□□ -0.46
Gabra1P62812 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.19□□□□□ -0.46
Gabra1P62812 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.19□□□□□ -0.46
Gabra1P62812 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gabra1P62812 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Gabra1P62812 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gabra1P62812 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gabra1P62812 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gabra1P62812 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms