Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Nphp4P59240 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Nphp4P59240 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nphp4P59240 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC19.43■□□□□ 0.7
Nphp4P59240 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC19.43■□□□□ 0.7
Nphp4P59240 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nphp4P59240 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nphp4P59240 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nphp4P59240 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp4P59240 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nphp4P59240 Gm15376-201ENSMUST00000122258 783 ntBASIC19.42■□□□□ 0.7
Nphp4P59240 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC19.42■□□□□ 0.7
Nphp4P59240 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC19.42■□□□□ 0.7
Nphp4P59240 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Gm19078-201ENSMUST00000206311 727 ntBASIC19.42■□□□□ 0.7
Nphp4P59240 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nphp4P59240 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.42■□□□□ 0.7
Nphp4P59240 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC19.42■□□□□ 0.7
Nphp4P59240 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC19.42■□□□□ 0.7
Nphp4P59240 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nphp4P59240 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Nphp4P59240 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nphp4P59240 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Gm2495-201ENSMUST00000191160 466 ntBASIC19.42■□□□□ 0.7
Nphp4P59240 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp4P59240 AC126549.2-201ENSMUST00000223997 1976 ntBASIC19.41■□□□□ 0.7
Nphp4P59240 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nphp4P59240 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nphp4P59240 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nphp4P59240 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC19.41■□□□□ 0.7
Nphp4P59240 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Gm11478-201ENSMUST00000117851 599 ntBASIC19.41■□□□□ 0.7
Nphp4P59240 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC19.41■□□□□ 0.7
Nphp4P59240 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC19.41■□□□□ 0.7
Nphp4P59240 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Gm26464-201ENSMUST00000157094 305 ntBASIC19.41■□□□□ 0.7
Nphp4P59240 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 AC131690.1-201ENSMUST00000218406 374 ntBASIC19.41■□□□□ 0.7
Nphp4P59240 AC155258.1-201ENSMUST00000219303 253 ntBASIC19.41■□□□□ 0.7
Nphp4P59240 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nphp4P59240 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nphp4P59240 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Nphp4P59240 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nphp4P59240 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Nphp4P59240 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nphp4P59240 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Nphp4P59240 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC19.4■□□□□ 0.7
Nphp4P59240 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC19.4■□□□□ 0.7
Nphp4P59240 Gm28911-201ENSMUST00000188837 117 ntBASIC19.4■□□□□ 0.7
Nphp4P59240 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC19.4■□□□□ 0.7
Nphp4P59240 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms