Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.8□□□□□ -0.04
Tubgcp3P58854 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Mir3113-201ENSMUST00000175478 76 ntBASIC14.8□□□□□ -0.04
Tubgcp3P58854 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Tubgcp3P58854 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tubgcp3P58854 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubgcp3P58854 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.79□□□□□ -0.04
Tubgcp3P58854 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.79□□□□□ -0.04
Tubgcp3P58854 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tubgcp3P58854 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.78□□□□□ -0.04
Tubgcp3P58854 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.78□□□□□ -0.04
Tubgcp3P58854 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.78□□□□□ -0.04
Tubgcp3P58854 Gm15427-201ENSMUST00000117288 531 ntBASIC14.78□□□□□ -0.04
Tubgcp3P58854 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.78□□□□□ -0.04
Tubgcp3P58854 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.78□□□□□ -0.04
Tubgcp3P58854 Gm15483-201ENSMUST00000120338 456 ntBASIC14.78□□□□□ -0.04
Tubgcp3P58854 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms