Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Abcd3P55096 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.97□□□□□ -0.33
Abcd3P55096 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.97□□□□□ -0.33
Abcd3P55096 Gm17271-201ENSMUST00000165535 355 ntBASIC12.97□□□□□ -0.33
Abcd3P55096 Gm27920-201ENSMUST00000183953 96 ntBASIC12.97□□□□□ -0.33
Abcd3P55096 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.97□□□□□ -0.33
Abcd3P55096 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.97□□□□□ -0.33
Abcd3P55096 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Abcd3P55096 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Abcd3P55096 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.97□□□□□ -0.33
Abcd3P55096 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Abcd3P55096 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.97□□□□□ -0.33
Abcd3P55096 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.96□□□□□ -0.33
Abcd3P55096 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Abcd3P55096 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Abcd3P55096 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.96□□□□□ -0.33
Abcd3P55096 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Abcd3P55096 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Gm11779-201ENSMUST00000118541 368 ntBASIC12.96□□□□□ -0.33
Abcd3P55096 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
Abcd3P55096 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.96□□□□□ -0.33
Abcd3P55096 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.96□□□□□ -0.33
Abcd3P55096 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Abcd3P55096 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Abcd3P55096 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Abcd3P55096 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Abcd3P55096 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Abcd3P55096 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Abcd3P55096 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Abcd3P55096 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Abcd3P55096 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Abcd3P55096 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Gm6973-201ENSMUST00000117080 721 ntBASIC12.95□□□□□ -0.34
Abcd3P55096 Gm15467-201ENSMUST00000120582 445 ntBASIC12.95□□□□□ -0.34
Abcd3P55096 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.95□□□□□ -0.34
Abcd3P55096 Gm2213-201ENSMUST00000197485 688 ntBASIC12.95□□□□□ -0.34
Abcd3P55096 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Gm20553-201ENSMUST00000204205 844 ntBASIC12.95□□□□□ -0.34
Abcd3P55096 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Abcd3P55096 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Abcd3P55096 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.95□□□□□ -0.34
Abcd3P55096 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.95□□□□□ -0.34
Abcd3P55096 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Abcd3P55096 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.95□□□□□ -0.34
Abcd3P55096 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abcd3P55096 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Abcd3P55096 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms