Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx6P54823 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Ddx6P54823 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx6P54823 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.68□□□□□ -0.06
Ddx6P54823 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.68□□□□□ -0.06
Ddx6P54823 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.68□□□□□ -0.06
Ddx6P54823 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.68□□□□□ -0.06
Ddx6P54823 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.68□□□□□ -0.06
Ddx6P54823 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ddx6P54823 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ddx6P54823 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx6P54823 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Ddx6P54823 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ddx6P54823 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
Ddx6P54823 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.67□□□□□ -0.06
Ddx6P54823 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.67□□□□□ -0.06
Ddx6P54823 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.67□□□□□ -0.06
Ddx6P54823 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.67□□□□□ -0.06
Ddx6P54823 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.67□□□□□ -0.06
Ddx6P54823 Gm45668-201ENSMUST00000211271 493 ntBASIC14.67□□□□□ -0.06
Ddx6P54823 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Gm5425-201ENSMUST00000214125 459 ntBASIC14.67□□□□□ -0.06
Ddx6P54823 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ddx6P54823 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx6P54823 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ddx6P54823 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.67□□□□□ -0.06
Ddx6P54823 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ddx6P54823 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx6P54823 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx6P54823 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx6P54823 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ddx6P54823 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.66□□□□□ -0.06
Ddx6P54823 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx6P54823 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.66□□□□□ -0.06
Ddx6P54823 Gm4804-201ENSMUST00000182234 999 ntBASIC14.66□□□□□ -0.06
Ddx6P54823 Gm10766-202ENSMUST00000194123 606 ntBASIC14.66□□□□□ -0.06
Ddx6P54823 Gm37917-201ENSMUST00000194711 392 ntBASIC14.66□□□□□ -0.06
Ddx6P54823 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.66□□□□□ -0.06
Ddx6P54823 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.66□□□□□ -0.06
Ddx6P54823 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.66□□□□□ -0.06
Ddx6P54823 Gm19220-201ENSMUST00000222682 803 ntBASIC14.66□□□□□ -0.06
Ddx6P54823 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.66□□□□□ -0.06
Ddx6P54823 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Ddx6P54823 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ddx6P54823 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx6P54823 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms