Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Msh6P54276 Gm5354-201ENSMUST00000182417 973 ntBASIC18.24■□□□□ 0.51
Msh6P54276 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Msh6P54276 Gm6007-201ENSMUST00000208170 823 ntBASIC18.24■□□□□ 0.51
Msh6P54276 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Msh6P54276 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Msh6P54276 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh6P54276 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Msh6P54276 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Msh6P54276 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.23■□□□□ 0.51
Msh6P54276 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.23■□□□□ 0.51
Msh6P54276 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.23■□□□□ 0.51
Msh6P54276 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.23■□□□□ 0.51
Msh6P54276 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.23■□□□□ 0.51
Msh6P54276 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.23■□□□□ 0.51
Msh6P54276 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Msh6P54276 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Msh6P54276 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Msh6P54276 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.22■□□□□ 0.51
Msh6P54276 Gm12882-201ENSMUST00000121696 517 ntBASIC18.22■□□□□ 0.51
Msh6P54276 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Msh6P54276 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.22■□□□□ 0.51
Msh6P54276 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.22■□□□□ 0.51
Msh6P54276 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.22■□□□□ 0.51
Msh6P54276 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.22■□□□□ 0.51
Msh6P54276 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Msh6P54276 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh6P54276 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.21■□□□□ 0.51
Msh6P54276 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Msh6P54276 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Msh6P54276 Gm12341-201ENSMUST00000119724 503 ntBASIC18.21■□□□□ 0.51
Msh6P54276 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Msh6P54276 Gm33320-201ENSMUST00000192232 530 ntBASIC18.21■□□□□ 0.51
Msh6P54276 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Msh6P54276 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Msh6P54276 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Msh6P54276 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.21■□□□□ 0.51
Msh6P54276 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.21■□□□□ 0.51
Msh6P54276 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh6P54276 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
Msh6P54276 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Msh6P54276 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Gm28911-201ENSMUST00000188837 117 ntBASIC18.2■□□□□ 0.5
Msh6P54276 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.2■□□□□ 0.5
Msh6P54276 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.2■□□□□ 0.5
Msh6P54276 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.2■□□□□ 0.5
Msh6P54276 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh6P54276 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms