Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pdx1P52946 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pdx1P52946 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pdx1P52946 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.32□□□□□ -0.12
Pdx1P52946 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pdx1P52946 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pdx1P52946 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.32□□□□□ -0.12
Pdx1P52946 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.32□□□□□ -0.12
Pdx1P52946 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.32□□□□□ -0.12
Pdx1P52946 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.32□□□□□ -0.12
Pdx1P52946 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pdx1P52946 Gm26308-201ENSMUST00000157768 69 ntBASIC14.32□□□□□ -0.12
Pdx1P52946 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.32□□□□□ -0.12
Pdx1P52946 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.32□□□□□ -0.12
Pdx1P52946 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.32□□□□□ -0.12
Pdx1P52946 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.32□□□□□ -0.12
Pdx1P52946 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.32□□□□□ -0.12
Pdx1P52946 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.32□□□□□ -0.12
Pdx1P52946 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Pdx1P52946 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pdx1P52946 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pdx1P52946 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pdx1P52946 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pdx1P52946 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdx1P52946 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pdx1P52946 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pdx1P52946 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pdx1P52946 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pdx1P52946 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.31□□□□□ -0.12
Pdx1P52946 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pdx1P52946 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pdx1P52946 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pdx1P52946 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.31□□□□□ -0.12
Pdx1P52946 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Gm13015-201ENSMUST00000118674 204 ntBASIC14.31□□□□□ -0.12
Pdx1P52946 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.31□□□□□ -0.12
Pdx1P52946 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.31□□□□□ -0.12
Pdx1P52946 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.31□□□□□ -0.12
Pdx1P52946 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.31□□□□□ -0.12
Pdx1P52946 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.31□□□□□ -0.12
Pdx1P52946 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdx1P52946 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pdx1P52946 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pdx1P52946 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdx1P52946 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.3□□□□□ -0.12
Pdx1P52946 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pdx1P52946 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.3□□□□□ -0.12
Pdx1P52946 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms