Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Gm44492-201ENSMUST00000197012 141 ntBASIC14.04□□□□□ -0.16
Hnf4aP49698 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hnf4aP49698 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hnf4aP49698 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Mir3113-201ENSMUST00000175478 76 ntBASIC14.03□□□□□ -0.16
Hnf4aP49698 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.03□□□□□ -0.16
Hnf4aP49698 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.03□□□□□ -0.16
Hnf4aP49698 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hnf4aP49698 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hnf4aP49698 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hnf4aP49698 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hnf4aP49698 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hnf4aP49698 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hnf4aP49698 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hnf4aP49698 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hnf4aP49698 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hnf4aP49698 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Hnf4aP49698 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hnf4aP49698 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.02□□□□□ -0.16
Hnf4aP49698 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hnf4aP49698 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hnf4aP49698 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.02□□□□□ -0.17
Hnf4aP49698 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hnf4aP49698 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hnf4aP49698 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.02□□□□□ -0.17
Hnf4aP49698 Gm15427-201ENSMUST00000117288 531 ntBASIC14.02□□□□□ -0.17
Hnf4aP49698 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.02□□□□□ -0.17
Hnf4aP49698 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Hnf4aP49698 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.02□□□□□ -0.17
Hnf4aP49698 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Hnf4aP49698 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Hnf4aP49698 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Hnf4aP49698 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms