Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GdnfP48540 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.71□□□□□ -0.38
GdnfP48540 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GdnfP48540 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
GdnfP48540 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GdnfP48540 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GdnfP48540 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GdnfP48540 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GdnfP48540 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GdnfP48540 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.71□□□□□ -0.38
GdnfP48540 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GdnfP48540 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GdnfP48540 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GdnfP48540 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GdnfP48540 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.7□□□□□ -0.38
GdnfP48540 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.7□□□□□ -0.38
GdnfP48540 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Gm37153-201ENSMUST00000193637 231 ntBASIC12.7□□□□□ -0.38
GdnfP48540 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.7□□□□□ -0.38
GdnfP48540 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GdnfP48540 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
GdnfP48540 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.7□□□□□ -0.38
GdnfP48540 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.7□□□□□ -0.38
GdnfP48540 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.7□□□□□ -0.38
GdnfP48540 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
GdnfP48540 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
GdnfP48540 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
GdnfP48540 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
GdnfP48540 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
GdnfP48540 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.69□□□□□ -0.38
GdnfP48540 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.69□□□□□ -0.38
GdnfP48540 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.69□□□□□ -0.38
GdnfP48540 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
GdnfP48540 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
GdnfP48540 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
GdnfP48540 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GdnfP48540 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.68□□□□□ -0.38
GdnfP48540 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.68□□□□□ -0.38
GdnfP48540 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.68□□□□□ -0.38
GdnfP48540 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.68□□□□□ -0.38
GdnfP48540 Gm45167-201ENSMUST00000208007 322 ntBASIC12.68□□□□□ -0.38
GdnfP48540 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
GdnfP48540 AV026068-213ENSMUST00000223675 1171 ntBASIC12.68□□□□□ -0.38
GdnfP48540 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.68□□□□□ -0.38
GdnfP48540 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Gm15590-201ENSMUST00000078419 552 ntBASIC12.68□□□□□ -0.38
GdnfP48540 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
GdnfP48540 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GdnfP48540 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms