Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Xcl1P47993 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Xcl1P47993 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Xcl1P47993 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Xcl1P47993 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Xcl1P47993 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Xcl1P47993 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Xcl1P47993 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC9.4□□□□□ -0.9
Xcl1P47993 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Xcl1P47993 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Xcl1P47993 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Xcl1P47993 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Xcl1P47993 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC9.4□□□□□ -0.91
Xcl1P47993 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Xcl1P47993 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Xcl1P47993 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Xcl1P47993 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Xcl1P47993 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.4□□□□□ -0.91
Xcl1P47993 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Xcl1P47993 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC9.39□□□□□ -0.91
Xcl1P47993 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC9.39□□□□□ -0.91
Xcl1P47993 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Gm7290-201ENSMUST00000104990 617 ntBASIC9.39□□□□□ -0.91
Xcl1P47993 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC9.39□□□□□ -0.91
Xcl1P47993 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Gm12918-201ENSMUST00000120234 636 ntBASIC9.39□□□□□ -0.91
Xcl1P47993 Gm15710-201ENSMUST00000121821 636 ntBASIC9.39□□□□□ -0.91
Xcl1P47993 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC9.39□□□□□ -0.91
Xcl1P47993 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC9.39□□□□□ -0.91
Xcl1P47993 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Gm37292-201ENSMUST00000192062 758 ntBASIC9.39□□□□□ -0.91
Xcl1P47993 Gm29707-201ENSMUST00000196325 491 ntBASIC9.39□□□□□ -0.91
Xcl1P47993 Gm5075-201ENSMUST00000196916 622 ntBASIC9.39□□□□□ -0.91
Xcl1P47993 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Gm4968-201ENSMUST00000071458 858 ntBASIC9.39□□□□□ -0.91
Xcl1P47993 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC9.39□□□□□ -0.91
Xcl1P47993 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC9.39□□□□□ -0.91
Xcl1P47993 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.39□□□□□ -0.91
Xcl1P47993 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC9.39□□□□□ -0.91
Xcl1P47993 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Xcl1P47993 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Xcl1P47993 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Gm21009-201ENSMUST00000197169 1669 ntBASIC9.39□□□□□ -0.91
Xcl1P47993 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Xcl1P47993 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 AC121801.1-201ENSMUST00000225363 1899 ntBASIC9.38□□□□□ -0.91
Xcl1P47993 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.38□□□□□ -0.91
Xcl1P47993 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms