Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-2P42586 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.27□□□□□ -0.29
Nkx2-2P42586 Gm44335-201ENSMUST00000196879 141 ntBASIC13.27□□□□□ -0.29
Nkx2-2P42586 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.27□□□□□ -0.29
Nkx2-2P42586 Gm44297-201ENSMUST00000198304 141 ntBASIC13.27□□□□□ -0.29
Nkx2-2P42586 Gm44346-201ENSMUST00000198851 141 ntBASIC13.27□□□□□ -0.29
Nkx2-2P42586 Gm43125-201ENSMUST00000201724 730 ntBASIC13.27□□□□□ -0.29
Nkx2-2P42586 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-2P42586 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.26□□□□□ -0.29
Nkx2-2P42586 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx2-2P42586 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx2-2P42586 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.26□□□□□ -0.29
Nkx2-2P42586 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms