Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sox6P40645 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.63□□□□□ -0.23
Sox6P40645 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.63□□□□□ -0.23
Sox6P40645 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.63□□□□□ -0.23
Sox6P40645 Gm10499-201ENSMUST00000174094 934 ntBASIC13.63□□□□□ -0.23
Sox6P40645 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox6P40645 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.63□□□□□ -0.23
Sox6P40645 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox6P40645 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sox6P40645 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox6P40645 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox6P40645 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox6P40645 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sox6P40645 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Gm12008-201ENSMUST00000117791 755 ntBASIC13.62□□□□□ -0.23
Sox6P40645 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.62□□□□□ -0.23
Sox6P40645 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.62□□□□□ -0.23
Sox6P40645 Gm4899-201ENSMUST00000178708 719 ntBASIC13.62□□□□□ -0.23
Sox6P40645 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.62□□□□□ -0.23
Sox6P40645 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.62□□□□□ -0.23
Sox6P40645 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sox6P40645 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Sox6P40645 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox6P40645 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.62□□□□□ -0.23
Sox6P40645 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox6P40645 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox6P40645 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox6P40645 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.61□□□□□ -0.23
Sox6P40645 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.61□□□□□ -0.23
Sox6P40645 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.61□□□□□ -0.23
Sox6P40645 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Sox6P40645 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms