Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox5P35710 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Sox5P35710 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox5P35710 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.82■□□□□ 0.12
Sox5P35710 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sox5P35710 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Sox5P35710 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Sox5P35710 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.82■□□□□ 0.12
Sox5P35710 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.82■□□□□ 0.12
Sox5P35710 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.82■□□□□ 0.12
Sox5P35710 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.82■□□□□ 0.12
Sox5P35710 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sox5P35710 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.82■□□□□ 0.12
Sox5P35710 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.82■□□□□ 0.12
Sox5P35710 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.82■□□□□ 0.12
Sox5P35710 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Sox5P35710 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox5P35710 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sox5P35710 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sox5P35710 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sox5P35710 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Gm27628-201ENSMUST00000184911 107 ntBASIC15.81■□□□□ 0.12
Sox5P35710 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox5P35710 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
Sox5P35710 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox5P35710 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
Sox5P35710 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
Sox5P35710 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sox5P35710 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Sox5P35710 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox5P35710 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Sox5P35710 Matn2-206ENSMUST00000228570 2798 ntBASIC15.8■□□□□ 0.12
Sox5P35710 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.8■□□□□ 0.12
Sox5P35710 Gm16198-201ENSMUST00000118766 670 ntBASIC15.8■□□□□ 0.12
Sox5P35710 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sox5P35710 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.8■□□□□ 0.12
Sox5P35710 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.8■□□□□ 0.12
Sox5P35710 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.8■□□□□ 0.12
Sox5P35710 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.8■□□□□ 0.12
Sox5P35710 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sox5P35710 Gm15590-201ENSMUST00000078419 552 ntBASIC15.8■□□□□ 0.12
Sox5P35710 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox5P35710 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms